Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Hhal_2176PFAM: periplasmic solute binding protein; KEGG: aeh:Mlg_1041 periplasmic solute binding protein; Belongs to the bacterial solute-binding protein 9 family. (320 aa)    
Predicted Functional Partners:
Hhal_2174
ABC-3 protein; PFAM: transport system permease protein; ABC-3 protein; KEGG: aeh:Mlg_1043 ABC-3 protein.
  
 0.995
Hhal_2175
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aeh:Mlg_1042 ABC transporter related.
 
  
 0.988
Hhal_1727
PFAM: ABC-3 protein; KEGG: aeh:Mlg_1197 ABC-3 protein.
  
 0.976
znuC
ABC transporter related protein; Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Zinc importer (TC 3.A.1.15.5) family.
  
  
 0.750
Hhal_0492
PFAM: ABC-3 protein; KEGG: aeh:Mlg_0970 ABC-3 protein.
  
  
 0.629
purL
Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate.
     
 0.547
rpsN
SSU ribosomal protein S14P; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.
  
  
 0.521
rpmB
PFAM: ribosomal protein L28; KEGG: aeh:Mlg_2641 ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.
  
    0.506
Hhal_1628
KEGG: rru:Rru_A0614 hypothetical protein.
  
  
 0.499
Hhal_1815
PFAM: cobalamin synthesis protein, P47K; cobalamin synthesis CobW domain protein; KEGG: aeh:Mlg_0228 cobalamin synthesis protein, P47K.
  
  
 0.499
Your Current Organism:
Halorhodospira halophila
NCBI taxonomy Id: 349124
Other names: H. halophila SL1, Halorhodospira halophila DSM 244, Halorhodospira halophila SL 1, Halorhodospira halophila SL1, Halorhodospira halophila str. SL1, Halorhodospira halophila strain SL1
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