STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
Hhal_2186PFAM: Heavy metal transport/detoxification protein; KEGG: aeh:Mlg_0323 heavy metal transport/detoxification protein. (70 aa)    
Predicted Functional Partners:
Hhal_2185
Heavy metal translocating P-type ATPase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: aeh:Mlg_0325 heavy metal translocating P-type ATPase.
  
 
 0.981
Hhal_2187
PFAM: Ion transport protein; KEGG: aeh:Mlg_0322 ion transport protein.
       0.773
Hhal_2188
PFAM: heat shock protein Hsp20; KEGG: aeh:Mlg_0320 heat shock protein HSP20; Belongs to the small heat shock protein (HSP20) family.
  
    0.560
Hhal_0075
Transcriptional regulator, ArsR family; PFAM: Rhodanese domain protein; regulatory protein, ArsR; KEGG: aeh:Mlg_0623 transcriptional regulator, ArsR family.
  
  
 0.475
Hhal_0646
Transcriptional regulator, ArsR family; PFAM: Rhodanese domain protein; regulatory protein, ArsR; KEGG: aeh:Mlg_0623 transcriptional regulator, ArsR family.
  
  
 0.475
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
   0.404
Your Current Organism:
Halorhodospira halophila
NCBI taxonomy Id: 349124
Other names: H. halophila SL1, Halorhodospira halophila DSM 244, Halorhodospira halophila SL 1, Halorhodospira halophila SL1, Halorhodospira halophila str. SL1, Halorhodospira halophila strain SL1
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