Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Hhal_2255PFAM: type II and III secretion system protein; NolW domain protein; KEGG: aeh:Mlg_2759 type IV pilus secretin PilQ. (372 aa)    
Predicted Functional Partners:
Hhal_2256
KEGG: bbr:BB0073 putative phosphohydrolase; TIGRFAM: putative deoxyguanosinetriphosphate triphosphohydrolase; PFAM: metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; Belongs to the dGTPase family. Type 2 subfamily.
       0.827
Hhal_2253
KEGG: aeh:Mlg_2754 penicillin-binding protein, 1A family; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase, family 51; penicillin-binding protein, transpeptidase.
 
   
 0.781
Hhal_2242
PFAM: Fimbrial protein pilin; KEGG: rme:Rmet_0472 fimbrial protein pilin.
 
   
 0.773
Hhal_2254
KEGG: bbr:BB0818 hypothetical protein.
       0.773
aroK
Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.
    
 0.762
Hhal_0316
Pilus retraction ATPase PilT; KEGG: hch:HCH_06352 Tfp pilus assembly protein, pilus retraction ATPase PilT; TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; SMART: AAA ATPase.
 
   
 0.742
Hhal_0332
PFAM: Fimbrial assembly family protein; KEGG: pca:Pcar_0381 MshA biogenesis protein MshI-1.
  
 
 0.734
Hhal_2022
Type 4 prepilin peptidase 1, Aspartic peptidase, MEROPS family A24A; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
  
 0.720
Hhal_0313
TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; KEGG: aeh:Mlg_0343 twitching motility protein.
  
  
 0.711
Hhal_2021
PFAM: type II secretion system protein; KEGG: ppu:PP_0633 type IV pili biogenesis protein PilC.
 
 
 
 0.681
Your Current Organism:
Halorhodospira halophila
NCBI taxonomy Id: 349124
Other names: H. halophila SL1, Halorhodospira halophila DSM 244, Halorhodospira halophila SL 1, Halorhodospira halophila SL1, Halorhodospira halophila str. SL1, Halorhodospira halophila strain SL1
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