Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Hhal_2273KEGG: aeh:Mlg_2768 hypothetical protein. (185 aa)    
Predicted Functional Partners:
Hhal_2272
PFAM: protein of unknown function DUF785; KEGG: aha:AHA_1517 ATP-dependent Zn proteases.
       0.773
der
Small GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.
   
    0.677
Hhal_2274
NAD(P) transhydrogenase, beta subunit; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the PNT beta subunit family.
       0.666
Hhal_2275
KEGG: aeh:Mlg_2770 pyridine nucleotide transhydrogenase subunit alpha.
       0.666
Hhal_2276
PFAM: alanine dehydrogenase/PNT domain protein; KEGG: aeh:Mlg_2771 NAD(P)(+) transhydrogenase (AB-specific).
       0.666
Hhal_2036
KEGG: aeh:Mlg_2088 hypothetical protein.
  
     0.649
Hhal_2271
KEGG: tcx:Tcr_1106 hypothetical protein.
  
    0.630
Hhal_2270
TIGRFAM: alpha-L-glutamate ligase-like protein; KEGG: tcx:Tcr_1107 alpha-L-glutamate ligase-related protein.
       0.623
Hhal_1258
KEGG: aeh:Mlg_1801 hypothetical protein.
  
     0.583
Hhal_0494
TIGRFAM: flagellar export protein FliJ; KEGG: aeh:Mlg_0713 flagellar export protein FliJ.
  
     0.570
Your Current Organism:
Halorhodospira halophila
NCBI taxonomy Id: 349124
Other names: H. halophila SL1, Halorhodospira halophila DSM 244, Halorhodospira halophila SL 1, Halorhodospira halophila SL1, Halorhodospira halophila str. SL1, Halorhodospira halophila strain SL1
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.