STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hhal_2370TIGRFAM: general secretion pathway protein D; PFAM: type II and III secretion system protein; NolW domain protein; KEGG: aeh:Mlg_2401 general secretion pathway protein D. (670 aa)    
Predicted Functional Partners:
Hhal_2376
KEGG: aeh:Mlg_2402 general secretion pathway protein C.
 
 
 0.996
Hhal_2375
TIGRFAM: general secretion pathway protein J; KEGG: aeh:Mlg_2388 general secretion pathway protein J.
 
  
 0.970
Hhal_2372
TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G; KEGG: aeh:Mlg_2391 general secretion pathway protein G.
 
  
 0.967
Hhal_2371
TIGRFAM: general secretion pathway protein F; PFAM: type II secretion system protein; KEGG: aeh:Mlg_2392 general secretion pathway protein F.
 
  
 0.962
Hhal_2374
TIGRFAM: general secretion pathway protein I; PFAM: type II secretion system protein I/J; KEGG: aeh:Mlg_2389 general secretion pathway protein I.
 
  
 0.959
Hhal_2377
Type II secretion system protein E (GspE); Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
  
 0.947
Hhal_2373
TIGRFAM: general secretion pathway protein H; KEGG: aeh:Mlg_2390 general secretion pathway protein H.
 
  
 0.925
Hhal_2389
KEGG: aeh:Mlg_2386 general secretion pathway protein K.
 
   
 0.870
Hhal_2387
General secretion pathway M protein; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
 
  
 0.841
Hhal_2388
General secretion pathway protein L; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
 
  
 0.836
Your Current Organism:
Halorhodospira halophila
NCBI taxonomy Id: 349124
Other names: H. halophila SL1, Halorhodospira halophila DSM 244, Halorhodospira halophila SL 1, Halorhodospira halophila SL1, Halorhodospira halophila str. SL1, Halorhodospira halophila strain SL1
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.