STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Hhal_2377Type II secretion system protein E (GspE); Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. (489 aa)    
Predicted Functional Partners:
Hhal_2371
TIGRFAM: general secretion pathway protein F; PFAM: type II secretion system protein; KEGG: aeh:Mlg_2392 general secretion pathway protein F.
 
 
 0.983
Hhal_2372
TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G; KEGG: aeh:Mlg_2391 general secretion pathway protein G.
 
 
 0.972
Hhal_2370
TIGRFAM: general secretion pathway protein D; PFAM: type II and III secretion system protein; NolW domain protein; KEGG: aeh:Mlg_2401 general secretion pathway protein D.
 
  
 0.953
Hhal_2374
TIGRFAM: general secretion pathway protein I; PFAM: type II secretion system protein I/J; KEGG: aeh:Mlg_2389 general secretion pathway protein I.
 
 
 0.930
Hhal_0325
PFAM: type II secretion system protein; KEGG: ilo:IL0371 type II secretory pathway.
 
 
 0.926
Hhal_2021
PFAM: type II secretion system protein; KEGG: ppu:PP_0633 type IV pili biogenesis protein PilC.
 
 
 0.926
Hhal_2373
TIGRFAM: general secretion pathway protein H; KEGG: aeh:Mlg_2390 general secretion pathway protein H.
 
 
 0.913
Hhal_2375
TIGRFAM: general secretion pathway protein J; KEGG: aeh:Mlg_2388 general secretion pathway protein J.
 
   
 0.890
Hhal_2376
KEGG: aeh:Mlg_2402 general secretion pathway protein C.
 
  
 0.890
Hhal_2388
General secretion pathway protein L; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
 
 
 0.890
Your Current Organism:
Halorhodospira halophila
NCBI taxonomy Id: 349124
Other names: H. halophila SL1, Halorhodospira halophila DSM 244, Halorhodospira halophila SL 1, Halorhodospira halophila SL1, Halorhodospira halophila str. SL1, Halorhodospira halophila strain SL1
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