STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dred_0130PFAM: glycerol-3-phosphate responsive antiterminator; KEGG: chy:CHY_1843 glycerol uptake operon antiterminator regulatory protein. (207 aa)    
Predicted Functional Partners:
Dred_2846
TIGRFAM: MIP family channel proteins; PFAM: major intrinsic protein; KEGG: btl:BALH_0917 glycerol uptake facilitator protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
 
    0.681
Dred_2844
Glycerol 3-phosphate dehydrogenase (quinone) subunit A; PFAM: FAD dependent oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: chy:CHY_1838 anaerobic glycerol-3-phosphate dehydrogenase, A subunit.
 
   
 0.543
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.
 
  
 0.487
Dred_0131
Transcriptional regulator, DeoR family; PFAM: regulatory protein GntR, HTH; regulatory protein, DeoR; regulatory protein, ArsR; Helix-turn-helix, type 11 domain protein; KEGG: sth:STH793 DeoR-family transcriptional regulator.
 
    0.479
Dred_0333
Transcriptional antiterminator, BglG family; PFAM: CAT RNA-binding domain protein; PRD domain protein; KEGG: bld:BLi01597 transcriptional antiterminator essential for the expression of the ptsGHI operon; RBL02128.
  
  
 0.412
Your Current Organism:
Desulfotomaculum reducens
NCBI taxonomy Id: 349161
Other names: D. reducens MI-1, Desulfotomaculum reducens MI-1, Desulfotomaculum reducens str. MI-1, Desulfotomaculum reducens strain MI-1
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