STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dred_0137PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: sfu:Sfum_1977 4Fe-4S ferredoxin, iron-sulfur binding domain protein. (1010 aa)    
Predicted Functional Partners:
Dred_1325
KEGG: mta:Moth_1196 heterodisulfide reductase, C subunit.
 
 0.983
Dred_0358
KEGG: chy:CHY_0927 putative heterodisulfide reductase, C subunit.
 
 0.980
Dred_1326
PFAM: protein of unknown function DUF224, cysteine-rich region domain protein; KEGG: mta:Moth_0810 protein of unknown function DUF224, cysteine-rich region.
 
 0.978
Dred_0357
CoB--CoM heterodisulfide reductase; PFAM: protein of unknown function DUF224, cysteine-rich region domain protein; KEGG: chy:CHY_0929 putative succinate dehydrogenase, subunit C.
 
 0.977
Dred_0634
Succinate dehydrogenase subunit C; PFAM: protein of unknown function DUF224, cysteine-rich region domain protein; KEGG: tbd:Tbd_1645 heterodisulfide reductase, B subunit.
  
 0.974
Dred_1329
PFAM: methyl-viologen-reducing hydrogenase, delta subunit; KEGG: mhu:Mhun_1842 methyl-viologen-reducing hydrogenase, delta subunit.
 
 0.965
Dred_0356
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: chy:CHY_0930 heterodisulfide reductase, subunit A, selenocysteine-containing.
  
  
 
0.916
Dred_1328
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: sfu:Sfum_3133 4Fe-4S ferredoxin, iron-sulfur binding domain protein.
  
  
0.903
Dred_0143
Tungsten-dependent benzoyl-CoA reductase-related protein bamE; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: sfu:Sfum_1977 4Fe-4S ferredoxin, iron-sulfur binding domain protein.
  
  
0.900
Dred_0144
PFAM: methyl-viologen-reducing hydrogenase, delta subunit; KEGG: sfu:Sfum_1973 methyl-viologen-reducing hydrogenase, delta subunit.
 
 0.880
Your Current Organism:
Desulfotomaculum reducens
NCBI taxonomy Id: 349161
Other names: D. reducens MI-1, Desulfotomaculum reducens MI-1, Desulfotomaculum reducens str. MI-1, Desulfotomaculum reducens strain MI-1
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