STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dred_0140PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: mta:Moth_0815 4Fe-4S ferredoxin, iron-sulfur binding. (334 aa)    
Predicted Functional Partners:
Dred_0141
PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: sfu:Sfum_1970 oxidoreductase FAD/NAD(P)-binding domain protein.
 
 0.999
Dred_0148
PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: sfu:Sfum_1970 oxidoreductase FAD/NAD(P)-binding domain protein.
  
 0.977
Dred_3186
KEGG: chy:CHY_2409 dissimilatory sulfite reductase subunit B; TIGRFAM: sulfite reductase, dissimilatory-type beta subunit; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region.
  
 
 0.944
Dred_0139
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: sfu:Sfum_1972 4Fe-4S ferredoxin, iron-sulfur binding domain protein.
 
     0.935
Dred_0697
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; nitrite and sulphite reductase 4Fe-4S region; KEGG: dde:Dde_2390 dissimilatory sulfite reductase (desulfoviridin) alpha and beta subunits-like.
  
 
 0.923
Dred_3187
KEGG: chy:CHY_2410 dissimilatory sulfite reductase alpha subunit; TIGRFAM: sulfite reductase, dissimilatory-type alpha subunit; PFAM: nitrite and sulphite reductase 4Fe-4S region.
  
 
 0.906
Dred_1362
PFAM: Pyridoxal-5'-phosphate-dependent enzyme, beta subunit; KEGG: pto:PTO0151 cysteine synthase.
     
 0.903
Dred_2871
TIGRFAM: cysteine synthases; cysteine synthase A; PFAM: Pyridoxal-5'-phosphate-dependent enzyme, beta subunit; KEGG: gme:Gmet_1558 cysteine synthase A; Belongs to the cysteine synthase/cystathionine beta- synthase family.
     
 0.900
Dred_0146
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: sfu:Sfum_1972 4Fe-4S ferredoxin, iron-sulfur binding domain protein.
 
     0.817
Dred_0032
KEGG: chy:CHY_0930 heterodisulfide reductase, subunit A, selenocysteine-containing.
 
   
 0.745
Your Current Organism:
Desulfotomaculum reducens
NCBI taxonomy Id: 349161
Other names: D. reducens MI-1, Desulfotomaculum reducens MI-1, Desulfotomaculum reducens str. MI-1, Desulfotomaculum reducens strain MI-1
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