STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dred_0146PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: sfu:Sfum_1972 4Fe-4S ferredoxin, iron-sulfur binding domain protein. (314 aa)    
Predicted Functional Partners:
Dred_0145
KEGG: gsu:GSU0089 heterodisulfide reductase subunit.
 
     0.944
Dred_0147
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: mta:Moth_0815 4Fe-4S ferredoxin, iron-sulfur binding.
 
     0.935
Dred_0148
PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: sfu:Sfum_1970 oxidoreductase FAD/NAD(P)-binding domain protein.
 
   
 0.915
Dred_1329
PFAM: methyl-viologen-reducing hydrogenase, delta subunit; KEGG: mhu:Mhun_1842 methyl-viologen-reducing hydrogenase, delta subunit.
     0.915
Dred_0144
PFAM: methyl-viologen-reducing hydrogenase, delta subunit; KEGG: sfu:Sfum_1973 methyl-viologen-reducing hydrogenase, delta subunit.
 
     0.913
Dred_2305
Ferredoxin 2; KEGG: tte:TTE0697 ferredoxin 2.
  
 
 0.881
Dred_0140
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: mta:Moth_0815 4Fe-4S ferredoxin, iron-sulfur binding.
 
     0.817
Dred_0141
PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: sfu:Sfum_1970 oxidoreductase FAD/NAD(P)-binding domain protein.
 
   
 0.807
Dred_0032
KEGG: chy:CHY_0930 heterodisulfide reductase, subunit A, selenocysteine-containing.
 
     0.790
Dred_0356
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: chy:CHY_0930 heterodisulfide reductase, subunit A, selenocysteine-containing.
 
     0.790
Your Current Organism:
Desulfotomaculum reducens
NCBI taxonomy Id: 349161
Other names: D. reducens MI-1, Desulfotomaculum reducens MI-1, Desulfotomaculum reducens str. MI-1, Desulfotomaculum reducens strain MI-1
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.