STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dred_0318PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: fnu:FN0827 ABC transporter ATP-binding protein. (229 aa)    
Predicted Functional Partners:
Dred_0320
PFAM: protein of unknown function DUF214; KEGG: ppd:Ppro_3235 protein of unknown function DUF214.
 
 0.998
Dred_2926
PFAM: protein of unknown function DUF214; KEGG: swo:Swol_2458 hypothetical protein.
 
 0.993
Dred_2974
PFAM: protein of unknown function DUF214; KEGG: dsy:DSY3655 hypothetical protein.
 
 0.993
Dred_0319
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bmb:BruAb1_1658 HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.979
Dred_1566
Oligopeptide/dipeptide ABC transporter, ATPase subunit; KEGG: bcl:ABC2415 oligopeptide ABC transporter ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
 
   
0.898
Dred_1376
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ctc:CTC00559 cystine/glutamine permease protein; TC 3.A.1.3.-.
 
 
  
 0.856
Dred_0321
Outer membrane protein-like protein; KEGG: tbr:Tb927.8.4950 kinesin.
  
 
 0.846
Dred_2928
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: swo:Swol_2456 hypothetical protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.837
Dred_2954
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: swo:Swol_0175 hypothetical protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.805
Dred_1827
Hypothetical protein.
   
 
 0.760
Your Current Organism:
Desulfotomaculum reducens
NCBI taxonomy Id: 349161
Other names: D. reducens MI-1, Desulfotomaculum reducens MI-1, Desulfotomaculum reducens str. MI-1, Desulfotomaculum reducens strain MI-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.