STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dred_0337PFAM: stress protein; KEGG: bld:BLi00354 YceC. (200 aa)    
Predicted Functional Partners:
Dred_0336
PFAM: stress protein; KEGG: ctc:CTC02234 tellurium resistance protein terD.
 
   
0.896
Dred_0345
Uncharacterized protein involved in stress response-like protein; KEGG: aci:ACIAD1958 tellurium resistance protein.
 
  
 0.894
Dred_0340
KEGG: ctc:CTC02238 putative ATP/GTP-binding protein.
 
   
 0.893
Dred_0342
KEGG: bca:BCE_5093 hypothetical protein.
 
     0.891
Dred_0341
KEGG: bca:BCE_5092 hypothetical protein.
 
    0.879
Dred_0338
PFAM: stress protein; KEGG: bsu:BG12768 similar to tellurium resistance protein.
 
   
0.877
Dred_0343
KEGG: bca:BCE_5094 hypothetical protein.
 
     0.874
Dred_0339
PFAM: Integral membrane protein TerC; KEGG: bsu:BG12770 similar to tellurium resistance protein.
  
  
 0.822
Dred_0334
KEGG: sma:SAV7387 tellurium resistance protein.
  
     0.775
Dred_0344
PFAM: protein of unknown function DUF124; KEGG: nca:Noca_1500 protein of unknown function DUF124.
 
     0.538
Your Current Organism:
Desulfotomaculum reducens
NCBI taxonomy Id: 349161
Other names: D. reducens MI-1, Desulfotomaculum reducens MI-1, Desulfotomaculum reducens str. MI-1, Desulfotomaculum reducens strain MI-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.