STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dred_0352PFAM: acetyl-CoA hydrolase/transferase; KEGG: dsy:DSY1711 hypothetical protein. (447 aa)    
Predicted Functional Partners:
Dred_1305
TIGRFAM: acetaldehyde dehydrogenase (acetylating); PFAM: aldehyde dehydrogenase; KEGG: dsy:DSY4993 hypothetical protein.
  
  
 0.508
Dred_3266
TIGRFAM: acetaldehyde dehydrogenase (acetylating); KEGG: dsy:DSY4993 hypothetical protein.
  
  
 0.508
Dred_0351
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: chy:CHY_1607 acyl-CoA dehydrogenase.
  
  
 0.501
tig
Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.
      
 0.483
Dred_0353
PFAM: alpha/beta hydrolase fold; Thioesterase; KEGG: dsy:DSY2637 hypothetical protein.
   
 
 0.478
Dred_3264
PFAM: microcompartments protein; KEGG: dsy:DSY4991 hypothetical protein.
      
 0.457
Dred_2819
PFAM: nitrogen regulatory protein P-II; KEGG: det:DET1156 nitrogen regulatory protein P-II.
   
  
 0.440
Dred_2820
PFAM: nitrogen regulatory protein P-II; KEGG: cac:CAC0254 nitrogen regulatory protein PII (nitrogen fixation nifHD).
   
  
 0.440
Dred_2861
PFAM: nitrogen regulatory protein P-II; KEGG: dsy:DSY4258 hypothetical protein.
   
  
 0.440
Dred_2863
PFAM: nitrogen regulatory protein P-II; KEGG: dsy:DSY4258 hypothetical protein.
   
  
 0.440
Your Current Organism:
Desulfotomaculum reducens
NCBI taxonomy Id: 349161
Other names: D. reducens MI-1, Desulfotomaculum reducens MI-1, Desulfotomaculum reducens str. MI-1, Desulfotomaculum reducens strain MI-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.