STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dred_0448KEGG: deh:cbdb_A1044 hypothetical protein. (194 aa)    
Predicted Functional Partners:
Dred_2168
PFAM: carbonic anhydrase; KEGG: bld:BLi03211 similar to carbonic anhydrase; RBL04833.
     
  0.900
Dred_0478
KEGG: pfl:PFL_1086 anhydrase, family 3 protein.
    
 
 0.792
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
    0.565
xpt
Xanthine phosphoribosyltransferase; Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis.
   
    0.565
Dred_1643
PFAM: Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: bcz:pE33L466_0441 possible sulfate transporter.
 
  
 0.549
Dred_0341
KEGG: bca:BCE_5092 hypothetical protein.
   
    0.542
Dred_0447
Putative signal-transduction protein with CBS domains; PFAM: CBS domain containing protein; KEGG: gka:GK0569 inosine-5-monophosphate dehydrogenase.
  
    0.498
Dred_0449
PFAM: transposase, IS4 family protein; KEGG: sec:SC089 transposase.
       0.408
Dred_1989
KEGG: tte:TTE0629 hypothetical protein.
  
    0.407
Dred_1992
KEGG: tte:TTE0629 hypothetical protein.
  
    0.407
Your Current Organism:
Desulfotomaculum reducens
NCBI taxonomy Id: 349161
Other names: D. reducens MI-1, Desulfotomaculum reducens MI-1, Desulfotomaculum reducens str. MI-1, Desulfotomaculum reducens strain MI-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.