STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dred_0449PFAM: transposase, IS4 family protein; KEGG: sec:SC089 transposase. (484 aa)    
Predicted Functional Partners:
Dred_0311
PFAM: transposase, IS4 family protein; KEGG: mgm:Mmc1_3053 transposase, IS4 family protein.
  
     0.708
Dred_2628
PFAM: transposase, IS4 family protein; KEGG: mgm:Mmc1_3053 transposase, IS4 family protein.
  
     0.708
Dred_0784
PFAM: transposase, IS4 family protein; KEGG: mgm:Mmc1_3053 transposase, IS4 family protein.
  
     0.707
Dred_3133
PFAM: transposase, IS4 family protein; KEGG: mgm:Mmc1_3053 transposase, IS4 family protein.
  
     0.707
Dred_0181
PFAM: transposase, IS4 family protein; KEGG: mgm:Mmc1_3053 transposase, IS4 family protein.
  
     0.706
Dred_0625
PFAM: transposase, IS4 family protein; KEGG: mgm:Mmc1_3053 transposase, IS4 family protein.
  
     0.706
Dred_1033
PFAM: transposase, IS4 family protein; KEGG: mgm:Mmc1_3053 transposase, IS4 family protein.
  
     0.706
Dred_1405
PFAM: transposase, IS4 family protein; KEGG: mgm:Mmc1_3053 transposase, IS4 family protein.
  
     0.706
Dred_3238
PFAM: transposase, IS4 family protein; KEGG: mgm:Mmc1_3053 transposase, IS4 family protein.
  
     0.706
Dred_0530
PFAM: transposase, IS4 family protein; KEGG: mgm:Mmc1_3053 transposase, IS4 family protein.
  
     0.694
Your Current Organism:
Desulfotomaculum reducens
NCBI taxonomy Id: 349161
Other names: D. reducens MI-1, Desulfotomaculum reducens MI-1, Desulfotomaculum reducens str. MI-1, Desulfotomaculum reducens strain MI-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.