STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dred_0700Respiratory nitrite reductase specific menaquinol--cytochrome-c reductase (NrfH) precursor; KEGG: swo:Swol_1522 cytochrome c nitrite reductase small subunit NrfH. (153 aa)    
Predicted Functional Partners:
Dred_0701
PFAM: cytochrome c552; KEGG: swo:Swol_1521 nitrite reductase (cytochrome; ammonia-forming); Belongs to the cytochrome c-552 family.
 
 0.999
nifH
Mo-nitrogenase iron protein subunit NifH; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein.
     
 0.916
hcp
Hybrid cluster protein; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O.
    
 0.912
hcp-2
Hybrid cluster protein; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O.
    
 0.912
hcp-3
Hydroxylamine reductase precursor; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O.
    
 0.912
Dred_3199
PFAM: Nitrate reductase, gamma subunit; KEGG: dsy:DSY4518 hypothetical protein.
     
 0.909
Dred_2806
KEGG: chy:CHY_0704 glutamine synthetase; TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase, catalytic region; glutamine synthetase, beta-Grasp.
     
 0.900
Dred_2807
KEGG: chy:CHY_0704 glutamine synthetase; TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase, catalytic region; glutamine synthetase, beta-Grasp.
     
 0.900
Dred_2810
Glutamate--ammonia ligase; PFAM: glutamine synthetase, catalytic region; glutamine synthetase, beta-Grasp; KEGG: chy:CHY_0704 glutamine synthetase.
     
 0.900
Dred_2817
Mo-nitrogenase MoFe protein subunit NifK; This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation; Belongs to the NifD/NifK/NifE/NifN family.
     
  0.900
Your Current Organism:
Desulfotomaculum reducens
NCBI taxonomy Id: 349161
Other names: D. reducens MI-1, Desulfotomaculum reducens MI-1, Desulfotomaculum reducens str. MI-1, Desulfotomaculum reducens strain MI-1
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