STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dred_0806Hypothetical protein. (95 aa)    
Predicted Functional Partners:
Dred_0807
Hypothetical protein; KEGG: art:Arth_2927 type II secretion system protein.
       0.741
Dred_0802
Hypothetical protein.
       0.671
Dred_0803
PFAM: type II secretion system protein E; KEGG: art:Arth_2933 type II secretion system protein E.
       0.671
Dred_0804
Hypothetical protein.
       0.671
Dred_0805
Hypothetical protein.
       0.671
Dred_0801
Hypothetical protein.
       0.629
Dred_0800
ATPases involved in chromosome partitioning-like protein; KEGG: swo:Swol_1636 septum site-determining protein MinD.
       0.427
Your Current Organism:
Desulfotomaculum reducens
NCBI taxonomy Id: 349161
Other names: D. reducens MI-1, Desulfotomaculum reducens MI-1, Desulfotomaculum reducens str. MI-1, Desulfotomaculum reducens strain MI-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.