STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dred_0835KEGG: mta:Moth_0344 hypothetical protein. (727 aa)    
Predicted Functional Partners:
Dred_0834
Hypothetical protein.
       0.773
Dred_2310
PFAM: lipolytic enzyme, G-D-S-L family; KEGG: mta:Moth_1716 lipolytic enzyme, G-D-S-L.
  
 
 0.636
Dred_2995
Hypothetical protein.
   
 
 0.575
Dred_0836
PFAM: EAL domain protein; KEGG: tcx:Tcr_1820 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains).
     
 0.501
Dred_2145
KEGG: ava:Ava_4779 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; Hpt domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein.
  
  
 0.477
Dred_0375
KEGG: swo:Swol_1310 hypothetical protein.
   
    0.463
Dred_2129
KEGG: swo:Swol_1310 hypothetical protein.
   
    0.463
Dred_0837
KEGG: mta:Moth_0347 hypothetical protein.
       0.436
Dred_0081
PFAM: Allergen V5/Tpx-1 family protein; KEGG: gka:GK1442 hypothetical protein.
   
    0.428
Dred_1374
PFAM: Allergen V5/Tpx-1 family protein; KEGG: bcl:ABC2540 hypothetical protein.
   
    0.428
Your Current Organism:
Desulfotomaculum reducens
NCBI taxonomy Id: 349161
Other names: D. reducens MI-1, Desulfotomaculum reducens MI-1, Desulfotomaculum reducens str. MI-1, Desulfotomaculum reducens strain MI-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.