STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dred_0902Peptidoglycan glycosyltransferase; PFAM: penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain; KEGG: tte:TTE1258 cell division protein FtsI/penicillin-binding protein 2. (566 aa)    
Predicted Functional Partners:
Dred_2545
Peptidoglycan glycosyltransferase; PFAM: penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain; KEGG: chy:CHY_0345 peptidoglycan biosynthesis transpeptidase.
  
  
0.930
Dred_1712
Cell elongation-specific peptidoglycan biosynthesis regulator RodA; PFAM: cell cycle protein; KEGG: mta:Moth_0910 cell cycle protein; Belongs to the SEDS family.
 
 0.929
Dred_0674
Cell division-specific peptidoglycan biosynthesis regulator FtsW; TIGRFAM: cell division protein FtsW; stage V sporulation protein E; PFAM: cell cycle protein; KEGG: swo:Swol_0825 cell cycle protein; Belongs to the SEDS family.
 
 0.928
rodA
Rod shape-determining protein RodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.
 
 0.918
Dred_0313
KEGG: chy:CHY_0358 peptidoglycan biosynthesis protein, FtsW/RodA/SpoVE family; Belongs to the SEDS family.
 
 
 0.881
Dred_2547
Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape.
 
 
 0.834
Dred_0679
Cell division protein FtsQ; Essential cell division protein.
  
 
 0.808
Dred_2548
TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: cell division protein FtsA; cell shape determining protein MreB/Mrl; KEGG: chy:CHY_0342 cell shape-determining protein MreB.
 
 0.730
Dred_3144
TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: cell shape determining protein MreB/Mrl; KEGG: mta:Moth_2371 cell shape determining protein, MreB/Mrl family.
 
 0.730
murF
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.
 
  
 0.718
Your Current Organism:
Desulfotomaculum reducens
NCBI taxonomy Id: 349161
Other names: D. reducens MI-1, Desulfotomaculum reducens MI-1, Desulfotomaculum reducens str. MI-1, Desulfotomaculum reducens strain MI-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.