STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dred_1097PFAM: protein of unknown function DUF441; KEGG: mta:Moth_0120 protein of unknown function DUF441. (151 aa)    
Predicted Functional Partners:
Dred_1678
PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bld:BLi02158 similar to multidrug resistance protein.
 
     0.727
Dred_1679
KEGG: mta:Moth_0117 hypothetical protein.
 
     0.720
Dred_1677
PFAM: (2R)-phospho-3-sulfolactate synthase, ComA; KEGG: mta:Moth_0118 (2R)-phospho-3-sulfolactate synthase, ComA.
 
     0.649
Dred_1924
KEGG: mta:Moth_1076 hypothetical protein.
  
     0.482
Dred_1061
Hypothetical protein; KEGG: bha:BH2792 mutants block sporulation after engulfment.
  
     0.408
Your Current Organism:
Desulfotomaculum reducens
NCBI taxonomy Id: 349161
Other names: D. reducens MI-1, Desulfotomaculum reducens MI-1, Desulfotomaculum reducens str. MI-1, Desulfotomaculum reducens strain MI-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.