STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dred_1306Propanediol utilization protein; Involved in 1,2-propanediol (1,2-PD) degradation by catalyzing the conversion of propanoyl-CoA to propanoyl-phosphate. (233 aa)    
Predicted Functional Partners:
ackA
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
   
 0.991
Dred_1305
TIGRFAM: acetaldehyde dehydrogenase (acetylating); PFAM: aldehyde dehydrogenase; KEGG: dsy:DSY4993 hypothetical protein.
   
 0.978
Dred_1495
PFAM: iron-containing alcohol dehydrogenase; KEGG: bld:BLi04290 putative alcohol dehydrogenase/acetaldehyde dehydrogenase; RBL03615; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
 
 
 0.931
Dred_1300
PFAM: cobalamin adenosyltransferase; KEGG: ctc:CTC02171 ethanolamine utilization protein.
    
 0.923
Dred_3266
TIGRFAM: acetaldehyde dehydrogenase (acetylating); KEGG: dsy:DSY4993 hypothetical protein.
   
 0.912
Dred_0047
2-oxoglutarate ferredoxin oxidoreductase, alpha subunit; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Transketolase domain protein; KEGG: chy:CHY_0043 putative keto/oxoacid ferredoxin oxidoreductase, alpha subunit.
    
  0.903
Dred_0048
PFAM: thiamine pyrophosphate enzyme domain protein TPP-binding; KEGG: chy:CHY_0044 putative keto/oxoacid ferredoxin oxidoreductase, beta subunit.
    
  0.903
Dred_2824
PFAM: thiamine pyrophosphate enzyme domain protein TPP-binding; KEGG: chy:CHY_0044 putative keto/oxoacid ferredoxin oxidoreductase, beta subunit.
    
  0.903
Dred_2825
2-oxoglutarate ferredoxin oxidoreductase, alpha subunit; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Transketolase domain protein; KEGG: chy:CHY_0043 putative keto/oxoacid ferredoxin oxidoreductase, alpha subunit.
    
  0.903
Dred_0039
KEGG: cya:CYA_0477 formate acetyltransferase; TIGRFAM: formate acetyltransferase; PFAM: formate C-acetyltransferase glycine radical; pyruvate formate-lyase, PFL.
    
 0.902
Your Current Organism:
Desulfotomaculum reducens
NCBI taxonomy Id: 349161
Other names: D. reducens MI-1, Desulfotomaculum reducens MI-1, Desulfotomaculum reducens str. MI-1, Desulfotomaculum reducens strain MI-1
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