STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dred_1333PFAM: Na+/solute symporter; KEGG: ppd:Ppro_1337 Na+/solute symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (466 aa)    
Predicted Functional Partners:
Dred_2956
PFAM: carbon starvation protein CstA; KEGG: ctc:CTC01977 carbon starvation protein A.
  
    0.687
Dred_0432
PFAM: protein of unknown function DUF162; KEGG: chy:CHY_0147 iron-sulfur cluster-binding protein.
   
    0.551
Dred_0433
CoB--CoM heterodisulfide reductase; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; protein of unknown function DUF162; protein of unknown function DUF224, cysteine-rich region domain protein; KEGG: mta:Moth_2305 hypothetical protein.
   
    0.551
Dred_0690
PFAM: protein of unknown function DUF162; protein of unknown function DUF224, cysteine-rich region domain protein; KEGG: ppd:Ppro_3135 protein of unknown function DUF224, cysteine-rich region domain protein.
   
    0.551
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
  
 0.549
xpt
Xanthine phosphoribosyltransferase; Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis.
   
  
 0.549
Dred_1495
PFAM: iron-containing alcohol dehydrogenase; KEGG: bld:BLi04290 putative alcohol dehydrogenase/acetaldehyde dehydrogenase; RBL03615; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
  
 0.548
Dred_0616
PFAM: sodium:dicarboxylate symporter; KEGG: lip:LI0018 proton/sodium-glutamate symport protein; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
  
  
 0.495
Dred_2145
KEGG: ava:Ava_4779 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; Hpt domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein.
  
  
 0.474
Dred_1332
Hypothetical protein; KEGG: cac:CAC1326 uncharacterized protein homolog T.maritima (4980675).
       0.473
Your Current Organism:
Desulfotomaculum reducens
NCBI taxonomy Id: 349161
Other names: D. reducens MI-1, Desulfotomaculum reducens MI-1, Desulfotomaculum reducens str. MI-1, Desulfotomaculum reducens strain MI-1
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