STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dred_1340PFAM: protein of unknown function DUF134; KEGG: mta:Moth_1655 protein of unknown function DUF134; Belongs to the UPF0251 family. (132 aa)    
Predicted Functional Partners:
Dred_1341
PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis; KEGG: dsy:DSY1612 hypothetical protein.
  
 0.954
Dred_2220
PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis; KEGG: cno:NT01CX_1490 hypothetical protein.
 
  
 0.718
Dred_0656
PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis; KEGG: dsy:DSY1612 hypothetical protein.
 
  
 0.677
Dred_2223
PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis; KEGG: mmp:MMP0451 hypothetical protein.
 
  
 0.657
Dred_0659
PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis; KEGG: mma:MM0988 hypothetical protein.
 
  
 0.656
Dred_2221
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: tte:TTE1891 MinD superfamily P-loop ATPase containing an inserted ferredoxin domain.
 
     0.556
Dred_0657
Cobyrinic acid a,c-diamide synthase; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; Cobyrinic acid a,c-diamide synthase; KEGG: mta:Moth_1408 cobyrinic acid a,c-diamide synthase.
 
     0.553
Dred_2222
Cobyrinic acid a,c-diamide synthase; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; Cobyrinic acid a,c-diamide synthase; KEGG: tte:TTE1892 MinD superfamily P-loop ATPase containing an inserted ferredoxin domain.
 
     0.544
Dred_0658
Cobyrinic acid a,c-diamide synthase; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; Cobyrinic acid a,c-diamide synthase; KEGG: mbu:Mbur_0617 cobyrinic acid a,c-diamide synthase.
 
     0.537
Dred_1339
Phage shock protein C, PspC; PFAM: PspC domain protein; KEGG: lsa:LSA0513 putative stress-responsive transcriptional regulator.
       0.456
Your Current Organism:
Desulfotomaculum reducens
NCBI taxonomy Id: 349161
Other names: D. reducens MI-1, Desulfotomaculum reducens MI-1, Desulfotomaculum reducens str. MI-1, Desulfotomaculum reducens strain MI-1
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