STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dred_1375Amino acid ABC transporter ATP-binding protein, PAAT family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sco:SCO5258 ATP-binding protein; TC 3.A.1.3.-. (263 aa)    
Predicted Functional Partners:
Dred_1376
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ctc:CTC00559 cystine/glutamine permease protein; TC 3.A.1.3.-.
 
 0.998
Dred_0728
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: chy:CHY_0505 glutamine ABC transporter, permease protein; TC 3.A.1.3.-.
 
 0.994
Dred_2234
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dsy:DSY1208 hypothetical protein; TC 3.A.1.3.-.
 
 0.993
Dred_0742
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: btl:BALH_0357 amino acid ABC transporter, permease component; TC 3.A.1.3.-.
 
 0.987
Dred_1377
Amino acid ABC transporter substrate-binding protein, PAAT family; PFAM: extracellular solute-binding protein, family 3; SMART: ionotropic glutamate receptor; KEGG: ctc:CTC00557 cystine/glutamine-binding periplasmic protein; TC 3.A.1.3.-.
 
 0.950
Dred_2926
PFAM: protein of unknown function DUF214; KEGG: swo:Swol_2458 hypothetical protein.
 
      0.900
Dred_0320
PFAM: protein of unknown function DUF214; KEGG: ppd:Ppro_3235 protein of unknown function DUF214.
 
      0.899
Dred_1641
KEGG: mta:Moth_2097 ABC transporter related; TIGRFAM: ABC transporter, transmembrane region, type 1; PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase.
 
     
0.899
Dred_1642
KEGG: mta:Moth_2098 ABC transporter related; TIGRFAM: ABC transporter, transmembrane region, type 1; PFAM: ABC transporter related; SMART: AAA ATPase.
 
     
0.899
Dred_1722
PFAM: inner-membrane translocator; KEGG: gsu:GSU3393 branched-chain amino acid ABC transporter, permease protein; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family.
 
    
 0.887
Your Current Organism:
Desulfotomaculum reducens
NCBI taxonomy Id: 349161
Other names: D. reducens MI-1, Desulfotomaculum reducens MI-1, Desulfotomaculum reducens str. MI-1, Desulfotomaculum reducens strain MI-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.