STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dred_1813PFAM: CBS domain containing protein; KEGG: blo:BL0920 possible efflux transporter protein. (154 aa)    
Predicted Functional Partners:
Dred_2470
Protein of unknown function DUF299; Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation/dephosphorylation.
  
  
 0.637
Dred_0853
KEGG: mta:Moth_0357 hypothetical protein.
  
     0.605
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
     
 0.568
Dred_1849
Tungstate/molybdate binding protein; KEGG: sat:SYN_00077 ABC-type molybdate transport system, periplasmic component.
  
     0.542
Dred_0999
KEGG: sdn:Sden_1691 hypothetical protein.
  
     0.534
Dred_2345
SMART: Pyrrolo-quinoline quinone; KEGG: swo:Swol_1743 hypothetical protein.
  
     0.517
Dred_1264
PFAM: protein of unknown function DUF81; KEGG: dsy:DSY1995 hypothetical protein.
  
     0.513
Dred_1273
KEGG: mja:MJ0582 hypothetical protein.
  
     0.500
Dred_0998
TIGRFAM: YD repeat protein; PFAM: Salmonella virulence plasmid 65kDa B protein; YD repeat-containing protein; KEGG: reh:H16_B1352 insecticidal toxin complex protein.
  
     0.471
Dred_2420
TIGRFAM: C_GCAxxG_C_C family protein; KEGG: dsy:DSY2619 hypothetical protein.
  
     0.451
Your Current Organism:
Desulfotomaculum reducens
NCBI taxonomy Id: 349161
Other names: D. reducens MI-1, Desulfotomaculum reducens MI-1, Desulfotomaculum reducens str. MI-1, Desulfotomaculum reducens strain MI-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.