STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dred_1924KEGG: mta:Moth_1076 hypothetical protein. (189 aa)    
Predicted Functional Partners:
Dred_1923
KEGG: mta:Moth_1077 vesicle-fusing ATPase; PFAM: peptidase M41; AAA ATPase, central domain protein; SMART: AAA ATPase; Belongs to the AAA ATPase family.
 
     0.944
Dred_2504
KEGG: swo:Swol_1444 hypothetical protein.
  
     0.747
Dred_1155
Transcriptional regulator, Fis family; PFAM: protein of unknown function DUF1614; KEGG: chy:CHY_1924 hypothetical protein.
  
     0.726
Dred_1156
PFAM: Stage II sporulation P family protein; KEGG: chy:CHY_1923 putative stage II sporulation protein P.
  
     0.712
Dred_0080
KEGG: mta:Moth_0200 hypothetical protein.
  
     0.700
Dred_0173
PFAM: Shikimate/quinate 5-dehydrogenase; KEGG: chy:CHY_2367 hypothetical protein.
  
     0.688
Dred_1322
KEGG: tte:TTE2548 small, acid-soluble spore proteins, alpha/be.
  
     0.676
Dred_1679
KEGG: mta:Moth_0117 hypothetical protein.
  
     0.676
cinA
TIGRFAM: competence/damage-inducible protein CinA; PFAM: molybdopterin binding domain; CinA domain protein; KEGG: dsy:DSY1955 hypothetical protein; Belongs to the CinA family.
       0.667
Dred_1675
KEGG: tte:TTE1573 hypothetical protein.
  
     0.652
Your Current Organism:
Desulfotomaculum reducens
NCBI taxonomy Id: 349161
Other names: D. reducens MI-1, Desulfotomaculum reducens MI-1, Desulfotomaculum reducens str. MI-1, Desulfotomaculum reducens strain MI-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.