Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Dred_2013Replicative DNA helicase loader DnaI; SMART: AAA ATPase; KEGG: mta:Moth_1184 IstB-like ATP-binding protein. (283 aa)    
Predicted Functional Partners:
Dred_2103
TIGRFAM: primosome, DnaD subunit; PFAM: DnaD and phage-associated region; KEGG: chy:CHY_1235 DNA replication protein DnaD.
 
  
 0.783
Dred_2012
Hypothetical protein.
       0.773
Dred_3301
Primary replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.
  
 
 0.728
Dred_2011
PFAM: t-RNA-binding domain protein; KEGG: cac:CAC2356 phenylalanyl-tRNA synthetase (beta subunit); Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
     
 0.710
Dred_0117
TIGRFAM: SpoIID/LytB domain; PFAM: Stage II sporulation D domain protein; KEGG: chy:CHY_0206 SpoIID/LytB domain protein.
   
    0.652
Dred_2014
Hypothetical protein.
       0.462
Dred_1918
KEGG: mta:Moth_1082 hypothetical protein.
  
     0.426
Dred_2377
KEGG: swo:Swol_1786 hypothetical protein.
  
     0.420
Your Current Organism:
Desulfotomaculum reducens
NCBI taxonomy Id: 349161
Other names: D. reducens MI-1, Desulfotomaculum reducens MI-1, Desulfotomaculum reducens str. MI-1, Desulfotomaculum reducens strain MI-1
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