Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 annotation | node2 annotation | score |
| Dred_0458 | Dred_0685 | KEGG: tte:TTE2552 pro-sigma-E processing factor spoIIR. | Sporulation factor SpoIIGA, Unknown type peptidase, MEROPS family U04; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | 0.909 |
| Dred_0458 | Dred_0688 | KEGG: tte:TTE2552 pro-sigma-E processing factor spoIIR. | PFAM: PRC-barrel domain protein; KEGG: mta:Moth_0855 PRC-barrel. | 0.887 |
| Dred_0458 | Dred_1059 | KEGG: tte:TTE2552 pro-sigma-E processing factor spoIIR. | KEGG: chy:CHY_2004 putative sporulation protein. | 0.776 |
| Dred_0458 | Dred_1060 | KEGG: tte:TTE2552 pro-sigma-E processing factor spoIIR. | KEGG: mta:Moth_1532 hypothetical protein. | 0.788 |
| Dred_0458 | Dred_1095 | KEGG: tte:TTE2552 pro-sigma-E processing factor spoIIR. | PFAM: protein of unknown function DUF95, transmembrane; KEGG: swo:Swol_0605 uncharacterized membrane protein. | 0.597 |
| Dred_0458 | Dred_1945 | KEGG: tte:TTE2552 pro-sigma-E processing factor spoIIR. | KEGG: swo:Swol_0912 hypothetical protein. | 0.725 |
| Dred_0458 | Dred_2080 | KEGG: tte:TTE2552 pro-sigma-E processing factor spoIIR. | PFAM: nucleoside recognition domain protein; KEGG: mta:Moth_0938 nucleoside recognition. | 0.788 |
| Dred_0458 | Dred_2485 | KEGG: tte:TTE2552 pro-sigma-E processing factor spoIIR. | PFAM: putative stage IV sporulation YqfD; KEGG: mta:Moth_0592 putative stage IV sporulation YqfD. | 0.801 |
| Dred_0458 | Dred_2486 | KEGG: tte:TTE2552 pro-sigma-E processing factor spoIIR. | PFAM: protein of unknown function DUF1429; KEGG: mta:Moth_0591 protein of unknown function DUF1429. | 0.706 |
| Dred_0458 | Dred_3145 | KEGG: tte:TTE2552 pro-sigma-E processing factor spoIIR. | TIGRFAM: regulatory protein, DeoR; KEGG: chy:CHY_2534 stage III sporulation protein D. | 0.878 |
| Dred_0685 | Dred_0458 | Sporulation factor SpoIIGA, Unknown type peptidase, MEROPS family U04; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | KEGG: tte:TTE2552 pro-sigma-E processing factor spoIIR. | 0.909 |
| Dred_0685 | Dred_0688 | Sporulation factor SpoIIGA, Unknown type peptidase, MEROPS family U04; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | PFAM: PRC-barrel domain protein; KEGG: mta:Moth_0855 PRC-barrel. | 0.875 |
| Dred_0685 | Dred_1059 | Sporulation factor SpoIIGA, Unknown type peptidase, MEROPS family U04; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | KEGG: chy:CHY_2004 putative sporulation protein. | 0.756 |
| Dred_0685 | Dred_1060 | Sporulation factor SpoIIGA, Unknown type peptidase, MEROPS family U04; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | KEGG: mta:Moth_1532 hypothetical protein. | 0.786 |
| Dred_0685 | Dred_1095 | Sporulation factor SpoIIGA, Unknown type peptidase, MEROPS family U04; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | PFAM: protein of unknown function DUF95, transmembrane; KEGG: swo:Swol_0605 uncharacterized membrane protein. | 0.822 |
| Dred_0685 | Dred_1945 | Sporulation factor SpoIIGA, Unknown type peptidase, MEROPS family U04; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | KEGG: swo:Swol_0912 hypothetical protein. | 0.710 |
| Dred_0685 | Dred_2080 | Sporulation factor SpoIIGA, Unknown type peptidase, MEROPS family U04; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | PFAM: nucleoside recognition domain protein; KEGG: mta:Moth_0938 nucleoside recognition. | 0.799 |
| Dred_0685 | Dred_2485 | Sporulation factor SpoIIGA, Unknown type peptidase, MEROPS family U04; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | PFAM: putative stage IV sporulation YqfD; KEGG: mta:Moth_0592 putative stage IV sporulation YqfD. | 0.806 |
| Dred_0685 | Dred_2486 | Sporulation factor SpoIIGA, Unknown type peptidase, MEROPS family U04; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | PFAM: protein of unknown function DUF1429; KEGG: mta:Moth_0591 protein of unknown function DUF1429. | 0.787 |
| Dred_0685 | Dred_3145 | Sporulation factor SpoIIGA, Unknown type peptidase, MEROPS family U04; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | TIGRFAM: regulatory protein, DeoR; KEGG: chy:CHY_2534 stage III sporulation protein D. | 0.859 |
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