STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dred_2181KEGG: mta:Moth_0100 hypothetical protein. (131 aa)    
Predicted Functional Partners:
ubiX
3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family.
 
   
 0.580
Dred_2897
KEGG: ctc:CTC00064 hypothetical protein.
  
     0.580
Dred_2180
KEGG: gka:GK0630 hypothetical protein.
       0.576
Dred_2377
KEGG: swo:Swol_1786 hypothetical protein.
  
     0.522
Dred_3068
Hypothetical protein; KEGG: bsu:BG13430 similar to hypothetical proteins from B. subtilis.
  
     0.490
Dred_0082
PFAM: Peptidoglycan-binding LysM; KEGG: ctc:CTC00280 hypothetical protein.
  
     0.485
Dred_0080
KEGG: mta:Moth_0200 hypothetical protein.
  
     0.457
Dred_2677
PFAM: cobalt transport protein; KEGG: mta:Moth_1457 cobalt transport protein.
  
     0.431
Dred_1310
PFAM: transport-associated; KEGG: mta:Moth_0194 transport-associated.
  
     0.410
Your Current Organism:
Desulfotomaculum reducens
NCBI taxonomy Id: 349161
Other names: D. reducens MI-1, Desulfotomaculum reducens MI-1, Desulfotomaculum reducens str. MI-1, Desulfotomaculum reducens strain MI-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.