STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dred_2188Transcriptional regulator, GntR family; PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: dsy:DSY2275 hypothetical protein. (240 aa)    
Predicted Functional Partners:
Dred_2189
L-lactate transport; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.
 
  
 0.718
Dred_0416
PFAM: regulatory proteins, IclR; KEGG: gka:GK1968 transcriptional regulator.
 
  
 0.655
Dred_2751
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR, HTH; UbiC transcription regulator-associated domain protein; KEGG: dsy:DSY4747 hypothetical protein.
  
    0.585
Dred_2758
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR, HTH; UbiC transcription regulator-associated domain protein; KEGG: dsy:DSY0248 hypothetical protein.
  
    0.577
Dred_2190
L-lactate transport; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.
 
  
 0.562
Dred_2187
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: chy:CHY_0434 transcriptional regulator, GntR family.
 
    
0.491
Dred_0689
PFAM: protein of unknown function DUF162; KEGG: dsy:DSY1922 hypothetical protein.
 
   
 0.471
Dred_0690
PFAM: protein of unknown function DUF162; protein of unknown function DUF224, cysteine-rich region domain protein; KEGG: ppd:Ppro_3135 protein of unknown function DUF224, cysteine-rich region domain protein.
 
   
 0.458
Dred_2205
L-lactate transport; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.
 
  
 0.433
Dred_0432
PFAM: protein of unknown function DUF162; KEGG: chy:CHY_0147 iron-sulfur cluster-binding protein.
 
   
 0.431
Your Current Organism:
Desulfotomaculum reducens
NCBI taxonomy Id: 349161
Other names: D. reducens MI-1, Desulfotomaculum reducens MI-1, Desulfotomaculum reducens str. MI-1, Desulfotomaculum reducens strain MI-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.