STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dred_2344PFAM: S-layer domain protein domain protein; KEGG: swo:Swol_1742 hypothetical protein. (455 aa)    
Predicted Functional Partners:
Dred_2345
SMART: Pyrrolo-quinoline quinone; KEGG: swo:Swol_1743 hypothetical protein.
 
     0.928
Dred_2999
PFAM: S-layer domain protein domain protein; KEGG: mta:Moth_0189 hypothetical protein.
  
     0.774
Dred_0818
PFAM: copper amine oxidase domain protein; KEGG: swo:Swol_0133 hypothetical protein.
  
     0.769
Dred_1055
PFAM: copper amine oxidase domain protein; KEGG: tte:TTE0524 hypothetical protein.
  
     0.769
Dred_2746
PFAM: copper amine oxidase domain protein; KEGG: sth:STH2256 hypothetical protein.
 
     0.769
Dred_0627
PFAM: copper amine oxidase domain protein; KEGG: mta:Moth_1575 copper amine oxidase-like.
  
     0.766
Dred_0939
PFAM: copper amine oxidase domain protein; KEGG: mta:Moth_2343 copper amine oxidase-like.
  
     0.761
Dred_3108
PFAM: polysaccharide pyruvyl transferase; KEGG: mta:Moth_0215 polysaccharide pyruvyl transferase.
  
     0.756
Dred_2788
PFAM: copper amine oxidase domain protein; KEGG: mta:Moth_1575 copper amine oxidase-like.
  
     0.743
Dred_0999
KEGG: sdn:Sden_1691 hypothetical protein.
  
    0.731
Your Current Organism:
Desulfotomaculum reducens
NCBI taxonomy Id: 349161
Other names: D. reducens MI-1, Desulfotomaculum reducens MI-1, Desulfotomaculum reducens str. MI-1, Desulfotomaculum reducens strain MI-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.