STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dred_2483KEGG: chy:CHY_0426 HDIG domain protein; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase, HD sub domain; metal-dependent phosphohydrolase, 7TM intracellular region; metal-dependent phosphohydrolase, 7TM extracellular region; SMART: metal-dependent phosphohydrolase, HD region. (719 aa)    
Predicted Functional Partners:
ybeY
Protein of unknown function UPF0054; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
  
  
 0.892
Dred_2484
PFAM: PhoH family protein; KH, type 1, domain protein; KEGG: mta:Moth_0593 PhoH-like protein.
     
 0.780
Dred_2481
PFAM: diacylglycerol kinase; KEGG: chy:CHY_0428 diacylglycerol kinase.
 
    0.775
Dred_2485
PFAM: putative stage IV sporulation YqfD; KEGG: mta:Moth_0592 putative stage IV sporulation YqfD.
       0.772
Dred_2486
PFAM: protein of unknown function DUF1429; KEGG: mta:Moth_0591 protein of unknown function DUF1429.
       0.772
Dred_2488
PFAM: protein of unknown function DUF1432; KEGG: dsy:DSY1747 hypothetical protein.
       0.642
Dred_2480
Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.
       0.584
Dred_2489
PFAM: protein of unknown function DUF107; KEGG: dsy:DSY1748 hypothetical protein.
       0.546
era
GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.
       0.525
Dred_2487
Hypothetical protein.
       0.511
Your Current Organism:
Desulfotomaculum reducens
NCBI taxonomy Id: 349161
Other names: D. reducens MI-1, Desulfotomaculum reducens MI-1, Desulfotomaculum reducens str. MI-1, Desulfotomaculum reducens strain MI-1
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.