STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dred_2614Hypothetical protein. (81 aa)    
Predicted Functional Partners:
Dred_2613
Superfamily II helicase and inactivated derivatives-like protein; KEGG: sus:Acid_5998 protein of unknown function DUF927.
       0.588
Dred_2615
KEGG: sps:SPs0524 hypothetical protein.
       0.412
Dred_2616
PFAM: helicase domain protein; type III restriction enzyme, res subunit; SMART: DEAD-like helicases-like; KEGG: syf:Synpcc7942_0725 DEAD/DEAH box helicase-like.
       0.412
Dred_2617
TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; nucleic acid binding, OB-fold, tRNA/helicase-type; KEGG: pha:PSHAa2705 single-strand binding protein (ssb) (helix-destabilizing protein).
       0.412
Dred_2618
KEGG: sgl:SG0930 hypothetical protein.
       0.412
Dred_2619
PFAM: siphovirus Gp157 family protein; KEGG: bat:BAS3538 hypothetical protein.
       0.410
Your Current Organism:
Desulfotomaculum reducens
NCBI taxonomy Id: 349161
Other names: D. reducens MI-1, Desulfotomaculum reducens MI-1, Desulfotomaculum reducens str. MI-1, Desulfotomaculum reducens strain MI-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.