STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dred_2736KEGG: tte:TTE0483 hypothetical protein. (165 aa)    
Predicted Functional Partners:
Dred_1145
KEGG: chy:CHY_1933 hypothetical protein.
  
     0.639
Dred_0184
KEGG: chy:CHY_2345 hypothetical protein.
  
     0.540
Dred_1122
KEGG: chy:CHY_1953 hypothetical protein.
  
     0.540
Dred_0209
KEGG: chy:CHY_2316 ribosomal protein L7ae family protein.
  
     0.510
Dred_2737
PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: chy:CHY_1296 methyl-accepting chemotaxis protein.
   
   0.505
Dred_1063
KEGG: mta:Moth_1529 hypothetical protein.
  
    0.488
Dred_1067
KEGG: chy:CHY_1996 hypothetical protein.
  
     0.479
nnrD
Carbohydrate kinase, YjeF related protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow t [...]
 
     0.432
Dred_2986
Protein translocase subunit secG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.
 
     0.426
Dred_1675
KEGG: tte:TTE1573 hypothetical protein.
  
     0.415
Your Current Organism:
Desulfotomaculum reducens
NCBI taxonomy Id: 349161
Other names: D. reducens MI-1, Desulfotomaculum reducens MI-1, Desulfotomaculum reducens str. MI-1, Desulfotomaculum reducens strain MI-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.