STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dred_2816KEGG: cac:CAC0258 nitrogenase iron-molibdenum cofactor biosinthesis protein, gene nifE; TIGRFAM: nitrogenase MoFe cofactor biosynthesis protein NifE; PFAM: oxidoreductase/nitrogenase, component 1; Belongs to the NifD/NifK/NifE/NifN family. (448 aa)    
Predicted Functional Partners:
nifH
Mo-nitrogenase iron protein subunit NifH; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein.
 0.992
Dred_2814
PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: cac:CAC0259 fusion nifN/K+nifB (nifN-nitrogenase iron molybdenum cofactor biosinthesis protein, nifK-nitrogenase molibdenum-iron protein beta chain, nifB-nitrogenase iron-molibdenum cofactor biosynthesis protein).
  
 0.983
Dred_2817
Mo-nitrogenase MoFe protein subunit NifK; This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation; Belongs to the NifD/NifK/NifE/NifN family.
  
0.971
Dred_2815
Nitrogenase; PFAM: oxidoreductase/nitrogenase, component 1; KEGG: cac:CAC0259 fusion nifN/K+nifB (nifN-nitrogenase iron molybdenum cofactor biosinthesis protein, nifK-nitrogenase molibdenum-iron protein beta chain, nifB-nitrogenase iron-molibdenum cofactor biosynthesis protein); Belongs to the NifD/NifK/NifE/NifN family.
   
0.967
Dred_2820
PFAM: nitrogen regulatory protein P-II; KEGG: cac:CAC0254 nitrogen regulatory protein PII (nitrogen fixation nifHD).
 
 
 0.952
Dred_2813
KEGG: rpc:RPC_4680 hypothetical protein.
 
   
 0.914
Dred_2818
Mo-nitrogenase MoFe protein subunit NifD precursor; KEGG: cac:CAC0256 nitrogenase molybdenum-iron protein, alpha chain (nitrogenase component I) gene nifD; TIGRFAM: nitrogenase molybdenum-iron protein alpha chain; nitrogenase component I, alpha chain; PFAM: oxidoreductase/nitrogenase, component 1.
 
  
0.886
Dred_2819
PFAM: nitrogen regulatory protein P-II; KEGG: det:DET1156 nitrogen regulatory protein P-II.
 
 
 0.886
Dred_2861
PFAM: nitrogen regulatory protein P-II; KEGG: dsy:DSY4258 hypothetical protein.
   
 
 0.508
Dred_2863
PFAM: nitrogen regulatory protein P-II; KEGG: dsy:DSY4258 hypothetical protein.
   
 
 0.508
Your Current Organism:
Desulfotomaculum reducens
NCBI taxonomy Id: 349161
Other names: D. reducens MI-1, Desulfotomaculum reducens MI-1, Desulfotomaculum reducens str. MI-1, Desulfotomaculum reducens strain MI-1
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