STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dred_2869PFAM: protein of unknown function DUF169; KEGG: dvl:Dvul_2784 protein of unknown function DUF169. (270 aa)    
Predicted Functional Partners:
Dred_1264
PFAM: protein of unknown function DUF81; KEGG: dsy:DSY1995 hypothetical protein.
  
     0.667
Dred_1999
PFAM: CBS domain containing protein.
  
     0.656
Dred_1509
PFAM: CBS domain containing protein.
  
     0.626
Dred_1452
PFAM: conserved hypothetical protein 698; KEGG: dsy:DSY0304 hypothetical protein.
  
     0.615
Dred_1273
KEGG: mja:MJ0582 hypothetical protein.
  
     0.612
Dred_1849
Tungstate/molybdate binding protein; KEGG: sat:SYN_00077 ABC-type molybdate transport system, periplasmic component.
  
     0.600
Dred_1349
KEGG: swo:Swol_1903 hypothetical protein.
  
     0.546
Dred_2224
PFAM: protein of unknown function DUF6, transmembrane; KEGG: cac:CA_P0174 membrane protein.
  
     0.524
Dred_1650
PFAM: protein of unknown function UPF0153; KEGG: cte:CT0872 hypothetical protein.
  
     0.496
Dred_1428
KEGG: dvl:Dvul_2832 hypothetical protein.
  
     0.482
Your Current Organism:
Desulfotomaculum reducens
NCBI taxonomy Id: 349161
Other names: D. reducens MI-1, Desulfotomaculum reducens MI-1, Desulfotomaculum reducens str. MI-1, Desulfotomaculum reducens strain MI-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.