STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dred_2895Transcriptional regulator, CopG family; PFAM: CopG domain protein DNA-binding domain protein; KEGG: mta:Moth_2166 putative transcriptional regulator, CopG family. (91 aa)    
Predicted Functional Partners:
Dred_2894
Transcriptional modulator of MazE/toxin, MazF; Toxic component of a type II toxin-antitoxin (TA) system.
  
 
 0.988
Dred_2893
Peptidase C26; PFAM: glutamine amidotransferase class-I; peptidase C26; KEGG: mta:Moth_2164 peptidase C26.
       0.715
Dred_2080
PFAM: nucleoside recognition domain protein; KEGG: mta:Moth_0938 nucleoside recognition.
  
     0.670
Dred_2892
PFAM: amidohydrolase; Amidohydrolase 3; KEGG: tte:TTE0530 imidazolonepropionase and related amidohydrolase.
       0.666
Dred_1095
PFAM: protein of unknown function DUF95, transmembrane; KEGG: swo:Swol_0605 uncharacterized membrane protein.
  
    0.662
Dred_1610
KEGG: sth:STH2563 hypothetical protein.
  
     0.648
Dred_1675
KEGG: tte:TTE1573 hypothetical protein.
  
     0.641
Dred_1060
KEGG: mta:Moth_1532 hypothetical protein.
  
     0.636
Dred_3314
PFAM: protein of unknown function DUF1256; KEGG: bld:BLi04367 YyaC.
  
     0.618
Dred_2896
TIGRFAM: acetolactate synthase, small subunit; PFAM: amino acid-binding ACT domain protein; KEGG: chy:CHY_1594 acetolactate synthase, small subunit.
       0.602
Your Current Organism:
Desulfotomaculum reducens
NCBI taxonomy Id: 349161
Other names: D. reducens MI-1, Desulfotomaculum reducens MI-1, Desulfotomaculum reducens str. MI-1, Desulfotomaculum reducens strain MI-1
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.