STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dred_2969PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pca:Pcar_2295 probable glutamate synthase small chain. (411 aa)    
Predicted Functional Partners:
Dred_2805
PFAM: glutamine amidotransferase, class-II; glutamate synthase, alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: bha:BH1728 glutamate synthase (large subunit).
 0.999
Dred_1070
Sulfide dehydrogenase (flavoprotein) subunit SudB; PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: chy:CHY_1992 hydrogenase gamma subunit.
 
 0.992
pyrD
Dihydroorotate oxidase B, catalytic subunit; Catalyzes the conversion of dihydroorotate to orotate with NAD(+) as electron acceptor.
 
 
 0.943
Dred_2804
TIGRFAM: glutamate synthases, NADH/NADPH, small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; HI0933 family protein; KEGG: syn:sll1027 NADH-dependent glutamate synthase small subunit.
  
  
 
0.922
Dred_2806
KEGG: chy:CHY_0704 glutamine synthetase; TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase, catalytic region; glutamine synthetase, beta-Grasp.
  
 
 0.917
Dred_2807
KEGG: chy:CHY_0704 glutamine synthetase; TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase, catalytic region; glutamine synthetase, beta-Grasp.
  
 
 0.917
Dred_2810
Glutamate--ammonia ligase; PFAM: glutamine synthetase, catalytic region; glutamine synthetase, beta-Grasp; KEGG: chy:CHY_0704 glutamine synthetase.
  
 
 0.914
Dred_1857
NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit; KEGG: chy:CHY_0732 Fe-hydrogenase, beta subunit.
 
  
 0.911
Dred_2191
PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: dsy:DSY0320 hypothetical protein.
  
 0.911
Dred_2280
PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: xtr:549387 nitrilase family, member 2 Pfam: CN_hydrolase PROSITE: CN_HYDROLASE.
  
 0.911
Your Current Organism:
Desulfotomaculum reducens
NCBI taxonomy Id: 349161
Other names: D. reducens MI-1, Desulfotomaculum reducens MI-1, Desulfotomaculum reducens str. MI-1, Desulfotomaculum reducens strain MI-1
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