STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dred_2995Hypothetical protein. (369 aa)    
Predicted Functional Partners:
Dred_2593
TIGRFAM: phage minor structural protein; KEGG: bcl:ABC0924 hypothetical protein.
  
 
 0.837
Dred_0371
PFAM: Ig domain protein, group 2 domain protein; KEGG: swo:Swol_1304 hypothetical protein.
   
 
 0.575
Dred_0835
KEGG: mta:Moth_0344 hypothetical protein.
   
 
 0.575
Dred_0966
KEGG: mta:Moth_0344 hypothetical protein.
   
 
 0.575
Dred_2125
PFAM: Ig domain protein, group 2 domain protein; KEGG: swo:Swol_1304 hypothetical protein.
   
 
 0.575
Dred_2597
TIGRFAM: phage putative tail component; KEGG: bat:BAS3790 hypothetical protein.
  
   0.550
Dred_2993
PFAM: beta-lactamase domain protein; KEGG: chy:CHY_0276 hypothetical protein.
       0.472
whiA
Protein of unknown function DUF199; Involved in cell division and chromosome segregation.
       0.472
birA
biotin--acetyl-CoA-carboxylase ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
     
 0.411
Dred_1215
TIGRFAM: phage tail tape measure protein, TP901 family; KEGG: mac:MA3805 hypothetical protein.
   
   0.408
Your Current Organism:
Desulfotomaculum reducens
NCBI taxonomy Id: 349161
Other names: D. reducens MI-1, Desulfotomaculum reducens MI-1, Desulfotomaculum reducens str. MI-1, Desulfotomaculum reducens strain MI-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.