hpf protein (Desulfotomaculum reducens) - STRING interaction network

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hpf

SSU ribosomal protein S30P / sigma 54 modulation protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth. (173 aa)

Predicted Functional Partners:

rpmC

0.960

rpsU

0.929

rpsI

0.922

rpmA

0.921

rpsF

0.921

rpmH

0.920

rplC

0.919

rplI

0.917

rpsE

0.915

rplO

0.915

Your Current Organism:

Desulfotomaculum reducens

NCBI taxonomy Id: 349161
Other names: D. reducens MI-1, Desulfotomaculum reducens MI-1, Desulfotomaculum reducens str. MI-1, Desulfotomaculum reducens strain MI-1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
hpf	rplC	Dred_3079	Dred_0215	SSU ribosomal protein S30P / sigma 54 modulation protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.	LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	0.919
hpf	rplI	Dred_3079	Dred_3303	SSU ribosomal protein S30P / sigma 54 modulation protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.	LSU ribosomal protein L9P; Binds to the 23S rRNA.	0.917
hpf	rplO	Dred_3079	Dred_0234	SSU ribosomal protein S30P / sigma 54 modulation protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.	LSU ribosomal protein L15P; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.	0.915
hpf	rpmA	Dred_3079	Dred_2534	SSU ribosomal protein S30P / sigma 54 modulation protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.	PFAM: ribosomal protein L27; KEGG: ser:SERP1209 ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.	0.921
hpf	rpmC	Dred_3079	Dred_0223	SSU ribosomal protein S30P / sigma 54 modulation protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.	PFAM: ribosomal protein L29; KEGG: tte:TTE2284 ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family.	0.960
hpf	rpmH	Dred_3079	Dred_3329	SSU ribosomal protein S30P / sigma 54 modulation protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.	PFAM: ribosomal protein L34; KEGG: dsy:DSY5060 50S ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family.	0.920
hpf	rpsE	Dred_3079	Dred_0232	SSU ribosomal protein S30P / sigma 54 modulation protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.	SSU ribosomal protein S5P; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family.	0.915
hpf	rpsF	Dred_3079	Dred_3308	SSU ribosomal protein S30P / sigma 54 modulation protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.	SSU ribosomal protein S6P; Binds together with S18 to 16S ribosomal RNA.	0.921
hpf	rpsI	Dred_3079	Dred_0257	SSU ribosomal protein S30P / sigma 54 modulation protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.	PFAM: ribosomal protein S9; KEGG: mta:Moth_2424 ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	0.922
hpf	rpsU	Dred_3079	Dred_2490	SSU ribosomal protein S30P / sigma 54 modulation protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.	PFAM: ribosomal protein S21; KEGG: dsy:DSY3123 30S ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.	0.929
rplC	hpf	Dred_0215	Dred_3079	LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	SSU ribosomal protein S30P / sigma 54 modulation protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.	0.919
rplC	rplI	Dred_0215	Dred_3303	LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	LSU ribosomal protein L9P; Binds to the 23S rRNA.	0.992
rplC	rplO	Dred_0215	Dred_0234	LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	LSU ribosomal protein L15P; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.	0.999
rplC	rpmA	Dred_0215	Dred_2534	LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	PFAM: ribosomal protein L27; KEGG: ser:SERP1209 ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.	0.995
rplC	rpmC	Dred_0215	Dred_0223	LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	PFAM: ribosomal protein L29; KEGG: tte:TTE2284 ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family.	0.998
rplC	rpmH	Dred_0215	Dred_3329	LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	PFAM: ribosomal protein L34; KEGG: dsy:DSY5060 50S ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family.	0.969
rplC	rpsE	Dred_0215	Dred_0232	LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	SSU ribosomal protein S5P; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family.	0.997
rplC	rpsF	Dred_0215	Dred_3308	LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	SSU ribosomal protein S6P; Binds together with S18 to 16S ribosomal RNA.	0.993
rplC	rpsI	Dred_0215	Dred_0257	LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	PFAM: ribosomal protein S9; KEGG: mta:Moth_2424 ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	0.996
rplC	rpsU	Dred_0215	Dred_2490	LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	PFAM: ribosomal protein S21; KEGG: dsy:DSY3123 30S ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.	0.951

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