STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dred_3140KEGG: cno:NT01CX_1557 conserved protein, putative. (262 aa)    
Predicted Functional Partners:
Dred_1720
Amino acid/amide ABC transporter substrate-binding protein, HAAT family; PFAM: Extracellular ligand-binding receptor; KEGG: gsu:GSU3401 branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein, putative; TC 3.A.1.4.-.
  
  
 0.635
Dred_1721
PFAM: inner-membrane translocator; KEGG: gsu:GSU3394 branched-chain amino acid ABC transporter, permease protein; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family.
  
  
 0.635
Dred_2239
PFAM: inner-membrane translocator; KEGG: chy:CHY_2231 high affinity branched-chain amino acid ABC transporter, permease protein; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family.
  
  
 0.635
Dred_2240
Amino acid/amide ABC transporter substrate-binding protein, HAAT family; PFAM: Extracellular ligand-binding receptor; KEGG: chy:CHY_2238 high affinity branched-chain amino acid ABC transporter, amino acid-binding protein; TC 3.A.1.4.-.
  
  
 0.635
Dred_2934
Amino acid/amide ABC transporter membrane protein 1, HAAT family; PFAM: inner-membrane translocator; KEGG: sfu:Sfum_0861 inner-membrane translocator; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family.
  
  
 0.635
Dred_2935
Amino acid/amide ABC transporter substrate-binding protein, HAAT family; PFAM: Extracellular ligand-binding receptor; KEGG: lip:LI0496 branched chain amino acid ABC transporter, periplasmic amino acid-binding protein; TC 3.A.1.4.-.
  
  
 0.635
Dred_1723
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gsu:GSU3392 branched-chain amino acid ABC transporter, ATP-binding protein; TC 3.A.1.4.-.
  
  
 0.632
Dred_2237
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mta:Moth_2499 ABC transporter related; TC 3.A.1.4.-.
  
  
 0.632
Dred_2932
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: chy:CHY_2229 high affinity branched-chain amino acid ABC transporter, ATP-binding protein; TC 3.A.1.4.-.
  
  
 0.632
Dred_1724
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gsu:GSU3391 branched-chain amino acid ABC transporter, ATP-binding protein; TC 3.A.1.4.-.
  
  
 0.618
Your Current Organism:
Desulfotomaculum reducens
NCBI taxonomy Id: 349161
Other names: D. reducens MI-1, Desulfotomaculum reducens MI-1, Desulfotomaculum reducens str. MI-1, Desulfotomaculum reducens strain MI-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.