STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dred_3274KEGG: dsy:DSY5001 hypothetical protein. (223 aa)    
Predicted Functional Partners:
Dred_3273
TIGRFAM: ethanolamine utilization protein EutJ family protein; KEGG: dsy:DSY5000 hypothetical protein.
 
  
 0.968
Dred_3272
PFAM: microcompartments protein; KEGG: dsy:DSY4999 hypothetical protein.
 
     0.954
Dred_3268
Transcriptional regulator; PFAM: protein of unknown function DUF861, cupin_3; Ethanolamine utilisation EutQ family protein; KEGG: dsy:DSY4995 hypothetical protein.
 
  
 0.941
Dred_3275
KEGG: dsy:DSY5002 hypothetical protein; Belongs to the EutP/PduV family.
 
  
 0.916
Dred_3271
PFAM: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml; KEGG: dsy:DSY4998 hypothetical protein.
 
  
 0.914
Dred_3270
PFAM: Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit; KEGG: dsy:DSY4997 hypothetical protein.
 
     0.891
Dred_3276
PFAM: microcompartments protein; KEGG: dsy:DSY5003 hypothetical protein.
 
   
 0.880
Dred_3269
PFAM: microcompartments protein; KEGG: dsy:DSY4996 hypothetical protein.
 
  
 0.879
Dred_1304
PFAM: protein of unknown function DUF861, cupin_3; Ethanolamine utilisation EutQ family protein; Cupin 2, conserved barrel domain protein; KEGG: dsy:DSY0409 hypothetical protein.
 
  
 0.866
Dred_3282
KEGG: dsy:DSY5009 hypothetical protein.
 
  
 0.806
Your Current Organism:
Desulfotomaculum reducens
NCBI taxonomy Id: 349161
Other names: D. reducens MI-1, Desulfotomaculum reducens MI-1, Desulfotomaculum reducens str. MI-1, Desulfotomaculum reducens strain MI-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.