Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Acry_0290PFAM: glycosyl transferase, group 1. (423 aa)    
Predicted Functional Partners:
Acry_0292
PFAM: glycosyl transferase, group 1.
 
     0.940
Acry_0291
PFAM: glycosyl transferase, group 1.
 
     0.937
Acry_0294
TIGRFAM: methyltransferase FkbM family.
 
     0.821
Acry_0293
Carbonic anhydrase/acetyltransferase isoleucine patch superfamily-like protein.
  
  
 0.788
Acry_0289
DegT/DnrJ/EryC1/StrS aminotransferase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent enzymes; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.732
Acry_2908
PFAM: glycosyl transferase, group 1.
  
     0.613
Acry_2941
PFAM: glycosyl transferase, group 1.
  
     0.555
Acry_0228
PFAM: glycosyl transferase, group 1.
  
     0.515
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.437
Your Current Organism:
Acidiphilium cryptum
NCBI taxonomy Id: 349163
Other names: A. cryptum JF-5, Acidiphilium cryptum JF-5, Acidiphilium cryptum str. JF-5, Acidiphilium cryptum strain JF-5, Acidiphilum cryptum JF-5
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