STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acry_0572Hypothetical protein; Binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP); Belongs to the AcsB/BcsB family. (768 aa)    
Predicted Functional Partners:
Acry_0569
Cellulose synthase (UDP-forming); PFAM: glycosyl transferase, family 2; type IV pilus assembly PilZ.
 
 
 0.987
Acry_0570
Cellulase; PFAM: glycoside hydrolase, family 8.
 
  
 0.914
alaS
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
 
 
 0.896
htpG
Heat shock protein Hsp90; Molecular chaperone. Has ATPase activity.
   
 0.852
Acry_1292
PFAM: glycosyl transferase, family 2; General secretory system II, protein E domain protein.
  
 
 0.846
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.844
Acry_0013
Hypothetical protein.
   
 0.838
Acry_0568
PFAM: glycoside hydrolase, family 3 domain protein.
     
 0.776
Acry_0571
Hypothetical protein.
       0.773
Acry_3058
PFAM: nitrogen regulatory protein P-II; Belongs to the P(II) protein family.
    
 
 0.748
Your Current Organism:
Acidiphilium cryptum
NCBI taxonomy Id: 349163
Other names: A. cryptum JF-5, Acidiphilium cryptum JF-5, Acidiphilium cryptum str. JF-5, Acidiphilium cryptum strain JF-5, Acidiphilum cryptum JF-5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.