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Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Acry_0605NADH dehydrogenase (quinone); PFAM: NADH/Ubiquinone/plastoquinone (complex I). (506 aa)    
Predicted Functional Partners:
Acry_0606
PFAM: NADH-ubiquinone oxidoreductase, chain 49kDa.
 
 
 0.997
Acry_0607
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; NADH ubiquinone oxidoreductase, 20 kDa subunit.
 
 
 0.993
Acry_1400
PFAM: NADH-ubiquinone oxidoreductase, chain 49kDa.
 
 
 0.990
Acry_0608
PFAM: NADH/Ubiquinone/plastoquinone (complex I).
 
  
0.945
Acry_0637
Ni Fe-hydrogenase III large subunit-like protein.
 
 
 0.878
Acry_0603
Formate hydrogenlyase subunit 4-like protein.
 
 
 0.870
Acry_1397
Formate hydrogenlyase subunit 4-like protein.
 
 
 0.869
Acry_1401
PFAM: NADH ubiquinone oxidoreductase, 20 kDa subunit.
 
 
 0.862
Acry_0638
PFAM: NADH ubiquinone oxidoreductase, 20 kDa subunit.
 
 
 0.857
Acry_1398
Hydrogenase 4 membrane component (E)-like protein.
 
  
 0.852
Your Current Organism:
Acidiphilium cryptum
NCBI taxonomy Id: 349163
Other names: A. cryptum JF-5, Acidiphilium cryptum JF-5, Acidiphilium cryptum str. JF-5, Acidiphilium cryptum strain JF-5, Acidiphilum cryptum JF-5
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