Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Acry_0735Hypothetical protein. (76 aa)    
Predicted Functional Partners:
Acry_2839
TIGRFAM: phasin family protein.
  
     0.675
Acry_0734
Putative phage repressor; PFAM: peptidase S24, S26A and S26B; Belongs to the peptidase S24 family.
 
     0.649
Acry_0657
Hypothetical protein.
  
     0.630
Acry_1240
Hypothetical protein.
  
     0.605
Acry_0974
Hypothetical protein.
  
     0.580
Acry_2682
PFAM: AsmA family protein.
  
     0.569
Acry_0155
TIGRFAM: phasin family protein.
  
     0.560
Acry_0736
PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase.
       0.553
Acry_2699
Hypothetical protein.
  
     0.542
Acry_0407
PFAM: protein of unknown function DUF1150.
  
     0.521
Your Current Organism:
Acidiphilium cryptum
NCBI taxonomy Id: 349163
Other names: A. cryptum JF-5, Acidiphilium cryptum JF-5, Acidiphilium cryptum str. JF-5, Acidiphilium cryptum strain JF-5, Acidiphilum cryptum JF-5
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