Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Acry_1000PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; UDP-glucose/GDP-mannose dehydrogenase. (678 aa)    
Predicted Functional Partners:
Acry_0997
PFAM: electron transfer flavoprotein beta-subunit.
 
 0.996
Acry_0999
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; protein of unknown function DUF224, cysteine-rich region domain protein.
 
  
 0.993
Acry_1003
PFAM: Rieske [2Fe-2S] domain protein.
 
 
  0.993
Acry_0998
PFAM: electron transfer flavoprotein beta-subunit; electron transfer flavoprotein, alpha subunit.
 
 
 0.992
Acry_1002
PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein.
 
  
 0.992
Acry_2069
PFAM: Rieske [2Fe-2S] domain protein.
 
 
  0.966
Acry_0994
TIGRFAM: sarcosine oxidase, alpha subunit family; PFAM: glucose-inhibited division protein A; glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein, C-terminal barrel; Belongs to the GcvT family.
 
 
 0.960
Acry_0993
PFAM: Sarcosine oxidase, delta subunit, heterotetrameric.
  
 
  0.953
Acry_0995
PFAM: Sarcosine oxidase, gamma subunit.
  
 
  0.952
Acry_0992
TIGRFAM: sarcosine oxidase, beta subunit family; PFAM: FAD dependent oxidoreductase.
  
 
 0.944
Your Current Organism:
Acidiphilium cryptum
NCBI taxonomy Id: 349163
Other names: A. cryptum JF-5, Acidiphilium cryptum JF-5, Acidiphilium cryptum str. JF-5, Acidiphilium cryptum strain JF-5, Acidiphilum cryptum JF-5
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