Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
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[Homology]
Score
Acry_1044Exporter of the RND superfamily-like protein. (858 aa)    
Predicted Functional Partners:
Acry_1831
PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB.
 
   
 0.827
Acry_0121
PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; NmrA family protein; Male sterility C-terminal domain.
 
     0.796
Acry_0413
Hypothetical protein.
 
     0.791
Acry_1685
TIGRFAM: squalene/oxidosqualene cyclase; squalene-hopene cyclase; PFAM: Prenyltransferase/squalene oxidase.
 
     0.790
Acry_1045
Uncharacterized protein; Related to arylsulfate sulfotransferase involved in siderophore biosynthesis-like protein.
       0.785
Acry_0122
Hypothetical protein.
 
     0.776
Acry_0120
PFAM: glycosyl transferase, family 2.
  
     0.736
Acry_0244
Hypothetical protein.
 
     0.731
Acry_1834
PFAM: toluene tolerance family protein.
 
     0.667
Acry_1836
PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB.
 
     0.611
Your Current Organism:
Acidiphilium cryptum
NCBI taxonomy Id: 349163
Other names: A. cryptum JF-5, Acidiphilium cryptum JF-5, Acidiphilium cryptum str. JF-5, Acidiphilium cryptum strain JF-5, Acidiphilum cryptum JF-5
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