Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Acry_1085Uncharacterized protein-like protein. (537 aa)    
Predicted Functional Partners:
Acry_2304
Hypothetical protein.
  
     0.712
Acry_2587
Hypothetical protein.
  
     0.591
Acry_0114
Hypothetical protein.
  
     0.575
Acry_1084
Hypothetical protein.
       0.536
Acry_2301
Hypothetical protein.
  
     0.504
Acry_2770
Hypothetical protein.
  
     0.489
Acry_1083
Hypothetical protein.
       0.488
Acry_0238
PFAM: RDD domain containing protein.
  
     0.466
Acry_1435
Hypothetical protein.
  
     0.448
Acry_0298
ABC-type Fe3+ transport system permease component-like protein.
  
     0.444
Your Current Organism:
Acidiphilium cryptum
NCBI taxonomy Id: 349163
Other names: A. cryptum JF-5, Acidiphilium cryptum JF-5, Acidiphilium cryptum str. JF-5, Acidiphilium cryptum strain JF-5, Acidiphilum cryptum JF-5
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