STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acry_1597PFAM: Carbohydrate-selective porin OprB. (480 aa)    
Predicted Functional Partners:
Acry_0122
Hypothetical protein.
  
     0.601
Acry_0173
PFAM: OmpA/MotB domain protein.
     
 0.563
Acry_0174
OmpA/MotB domain protein; PFAM: surface antigen msp4 family protein; OmpA/MotB domain protein.
     
 0.563
Acry_1836
PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB.
  
     0.548
Acry_1598
PFAM: General substrate transporter; major facilitator superfamily MFS_1.
       0.535
cpdA-2
Metallophosphoesterase; Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes.
       0.535
Acry_1044
Exporter of the RND superfamily-like protein.
  
     0.531
Acry_0413
Hypothetical protein.
  
     0.500
Acry_1776
Hypothetical protein.
  
     0.499
Acry_1596
Hypothetical protein.
       0.488
Your Current Organism:
Acidiphilium cryptum
NCBI taxonomy Id: 349163
Other names: A. cryptum JF-5, Acidiphilium cryptum JF-5, Acidiphilium cryptum str. JF-5, Acidiphilium cryptum strain JF-5, Acidiphilum cryptum JF-5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.